WormBase Tree Display for CDS: PPA37896
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PPA37896 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 99 | |||
206 | 305 | |||||
433 | 527 | |||||
574 | 718 | |||||
799 | 895 | |||||
1108 | 1187 | |||||
1302 | 1381 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-38.44 | ||
DB_remark | contains similarity to Pfam domain PF03911 (Sec61beta family); contains similarity to Interpro domains IPR030671 (Protein transport Sec61-beta/Sbh), IPR016482 (Protein transport protein SecG/Sec61-beta/Sbh) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00276265 | ||||
Corresponding_transcript | PPA37896.1 | |||||
Corresponding_protein | PP56962 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |