WormBase Tree Display for CDS: PPA37922
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PPA37922 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 367 | |||
389 | 468 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-44.18 | ||
DB_remark | contains similarity to Pfam domain PF00589 (Phage integrase family); contains similarity to Interpro domains IPR013762 (Integrase-like, catalytic domain superfamily), IPR002104 (Integrase, catalytic domain), IPR011010 (DNA breaking-rejoining enzyme, catalytic core) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00276291 | ||||
Corresponding_transcript | PPA37922.1 | |||||
Corresponding_protein | PP67484 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |