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WormBase Tree Display for CDS: PPA37944

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Name Class

PPA37944SMapS_parentSequencePPA_ChrI
StructureSource_exons14708
52585482
54945545
55785692
57736558
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-47.21
DB_remarkcontains similarity to Pfam domains PF03564 (Protein of unknown function (DUF1759)), PF05380 (Pao retrotransposon peptidase), PF17921 (Integrase zinc binding domain); contains similarity to Interpro domains IPR043502 (DNA/RNA polymerase superfamily), IPR012337 (Ribonuclease H-like superfamily), IPR005312 (Protein of unknown function DUF1759), IPR036397 (Ribonuclease H superfamily), IPR043128 (Reverse transcriptase/Diguanylate cyclase domain), IPR008042 (Retrotransposon, Pao), IPR041588 (Integrase zinc-binding domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00276313
Corresponding_transcriptPPA37944.1
Corresponding_proteinPP72300
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated