WormBase Tree Display for CDS: PPA37950
expand all nodes | collapse all nodes | view schema
PPA37950 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 5 | |||
340 | 478 | |||||
548 | 649 | |||||
1419 | 1495 | |||||
1561 | 1612 | |||||
1685 | 1812 | |||||
2013 | 2112 | |||||
2192 | 2305 | |||||
2553 | 2726 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-47.99 | ||
DB_remark | contains similarity to Pfam domain PF00085 (Thioredoxin); contains similarity to Interpro domains IPR013766 (Thioredoxin domain), IPR036249 (Thioredoxin-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00276319 | ||||
Corresponding_transcript | PPA37950.1 | |||||
Corresponding_protein | PP73959 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |