WormBase Tree Display for CDS: PPA38177
expand all nodes | collapse all nodes | view schema
PPA38177 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 91 | |||
498 | 640 | |||||
840 | 968 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S139-8.12 | ||
DB_remark | contains similarity to Pfam domain PF01681 (C6 domain); contains similarity to Interpro domain IPR002601 (C6 domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00276546 | ||||
Corresponding_transcript | PPA38177.1 | |||||
Corresponding_protein | PP71480 | |||||
Corresponding_oligo_set | GPL14372_Probes_88143 | |||||
Microarray_results | GPL14372_Probes_88143 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |