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WormBase Tree Display for CDS: PPA38190

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Name Class

PPA38190SMapS_parentSequencePPA_ChrI
StructureSource_exons11080
17871921
21682335
23402612
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-11.12
DB_remarkcontains similarity to Pfam domain PF14529 (Endonuclease-reverse transcriptase); contains similarity to Interpro domains IPR005135 (Endonuclease/exonuclease/phosphatase), IPR036691 (Endonuclease/exonuclease/phosphatase superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
Artificial_intronLow_quality_sequence
Start_not_found1
End_not_found
VisibleGeneWBGene00276559
Corresponding_transcriptPPA38190.1
Corresponding_proteinPP61309
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated