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WormBase Tree Display for CDS: PPA38216

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Name Class

PPA38216SMapS_parentSequencePPA_ChrI
StructureSource_exons155
354474
16251721
19472024
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-18.36
DB_remarkPPA-ACBP-3 protein; contains similarity to Pfam domain PF00887 (Acyl CoA binding protein); contains similarity to Interpro domains IPR035984 (Acyl-CoA binding protein superfamily), IPR014352 (FERM/acyl-CoA-binding protein superfamily), IPR000582 (Acyl-CoA-binding protein, ACBP)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00276585
Corresponding_transcriptPPA38216.1
Corresponding_proteinPP63656
Corresponding_oligo_setGPL14372_Probes_54771
GPL14372_Probes_54772
GPL14372_Probes_54773
GPL14372_Probes_54775
GPL14372_Probes_54776
GPL14372_Probes_54777
Matching_cDNAFG100858Inferred_automaticallytranscript_builder.pl
FG097872Inferred_automaticallytranscript_builder.pl
BM320166Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_54771
GPL14372_Probes_54772
GPL14372_Probes_54773
GPL14372_Probes_54775
GPL14372_Probes_54776
GPL14372_Probes_54777
RNASeq_FPKMWBls:0000032380.411From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010126.8385From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated