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WormBase Tree Display for CDS: PPA38232

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Name Class

PPA38232SMapS_parentSequencePPA_ChrI
StructureSource_exons1171
328408
457537
711884
11041181
13211365
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-23.53
DB_remarkcontains similarity to Pfam domain PF00635 (MSP (Major sperm protein) domain); contains similarity to Interpro domains IPR000535 (Major sperm protein (MSP) domain), IPR008962 (PapD-like superfamily), IPR013783 (Immunoglobulin-like fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00276601
Corresponding_transcriptPPA38232.1
Corresponding_proteinPP53770
Corresponding_oligo_setGPL14372_Probes_54462
GPL14372_Probes_54463
Microarray_resultsGPL14372_Probes_54462
GPL14372_Probes_54463
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated