WormBase Tree Display for CDS: PPA38238

PPA38238 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (26)
  DB_info: Database: pristionchus.org cds gene-UMM-S139-26.17
    DB_remark: contains similarity to Pfam domains PF02170 (PAZ domain), PF02171 (Piwi domain); contains similarity to Interpro domains IPR003100 (PAZ domain), IPR036085 (PAZ domain superfamily), IPR012337 (Ribonuclease H-like superfamily), IPR036397 (Ribonuclease H superfamily), IPR003165 (Piwi domain)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00276607
    Corresponding_transcript: PPA38238.1
    Corresponding_protein: PP66524
    Corresponding_oligo_set: GPL14372_Probes_54343
      GPL14372_Probes_54344
      GPL14372_Probes_54345
      GPL14372_Probes_54346
    Matching_cDNA: AI988735 Inferred_automatically: transcript_builder.pl
      AW097559 Inferred_automatically: transcript_builder.pl
      AI987000 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_54343
      GPL14372_Probes_54344
      GPL14372_Probes_54345
      GPL14372_Probes_54346
    RNASeq_FPKM: WBls:0000032 2.41798 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 5.71106 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
  Method: curated