WormBase Tree Display for CDS: PPA38273
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PPA38273 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 93 | |||
250 | 368 | |||||
498 | 638 | |||||
1349 | 1403 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S196-2.2 | ||
DB_remark | contains similarity to Pfam domain PF06602 (Myotubularin-like phosphatase domain); contains similarity to Interpro domains IPR010569 (Myotubularin-like, phosphatase domain), IPR029021 (Protein-tyrosine phosphatase-like), IPR030564 (Myotubularin family) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
End_not_found | ||||||
Visible | Gene | WBGene00276642 | ||||
Corresponding_transcript | PPA38273.1 | |||||
Corresponding_protein | PP56660 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |