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WormBase Tree Display for CDS: PPA38305

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Name Class

PPA38305SMapS_parentSequencePPA_ChrI
StructureSource_exons1207
4891856
19872196
27842855
47224928
54106747
68827100
DB_infoDatabasepristionchus.orgcdsgene-UMM-S196-4.58
DB_remarkcontains similarity to Pfam domain PF02816 (Alpha-kinase family); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR036465 (von Willebrand factor A-like domain superfamily), IPR004166 (Alpha-type protein kinase, alpha-kinase domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00276674
Corresponding_transcriptPPA38305.1
Corresponding_proteinPP55202
Corresponding_oligo_set (14)
Matching_cDNAFG099352Inferred_automaticallytranscript_builder.pl
Microarray_results (14)
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.23149From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated