Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA38318

expand all nodes | collapse all nodes | view schema

Name Class

PPA38318SMapS_parentSequencePPA_ChrI
StructureSource_exons (31)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S196-5.31
DB_remarkcontains similarity to Pfam domains PF00059 (Lectin C-type domain), PF00431 (CUB domain); contains similarity to Interpro domains IPR036465 (von Willebrand factor A-like domain superfamily), IPR000859 (CUB domain), IPR016186 (C-type lectin-like/link domain superfamily), IPR001304 (C-type lectin-like), IPR035914 (Spermadhesin, CUB domain superfamily), IPR016187 (C-type lectin fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00276687
Corresponding_transcriptPPA38318.1
Corresponding_proteinPP53219
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated