WormBase Tree Display for CDS: PPA38324
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| PPA38324 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (27) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S196-6.0 | ||
| DB_remark | contains similarity to Saccharomyces cerevisiae Huge dynein-related AAA-type ATPase (midasin); forms extended pre-60S particle with the Rix1 complex; involved with interaction partners Rsa4p and Ytm1p, in the ATP-dependent remodeling of the pre-60S particle at successive maturation steps during ribosomal biogenesis; involved in the removal of biogenesis factors including GTPase Nog2p prior to nuclear export; contains a hexameric AAA-motor head domain and a long flexible tail with a MIDAS (metal ion-dependent adhesion site) domain; SGD:YLR106C | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Start_not_found | 1 | |||||
| Visible | Gene | WBGene00276693 | ||||
| Corresponding_transcript | PPA38324.1 | |||||
| Corresponding_protein | PP58747 | |||||
| Corresponding_oligo_set | GPL14372_Probes_51023 | |||||
| GPL14372_Probes_51024 | ||||||
| Microarray_results | GPL14372_Probes_51023 | |||||
| GPL14372_Probes_51024 | ||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Method | curated |
