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WormBase Tree Display for CDS: PPA38326

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Name Class

PPA38326SMapS_parentSequencePPA_ChrI
StructureSource_exons (48)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S196-6.7
DB_remarkcontains similarity to Pfam domains PF00084 (Sushi repeat (SCR repeat)), PF00095 (WAP-type (Whey Acidic Protein) 'four-disulfide core'); contains similarity to Interpro domains IPR008197 (WAP-type 'four-disulfide core' domain), IPR000436 (Sushi/SCR/CCP domain), IPR035976 (Sushi/SCR/CCP superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00276695
Corresponding_transcriptPPA38326.1
Corresponding_proteinPP71555
Corresponding_oligo_setGPL14372_Probes_51046
Microarray_resultsGPL14372_Probes_51046
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated