WormBase Tree Display for CDS: PPA38354

PPA38354 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (15)
  DB_info: Database: pristionchus.org cds gene-UMM-S196-10.50
    DB_remark: contains similarity to Pfam domains PF00085 (Thioredoxin), PF04777 (Erv1 / Alr family), PF18371 (Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase); contains similarity to Interpro domains IPR017905 (ERV/ALR sulfhydryl oxidase domain), IPR039798 (Sulfhydryl oxidase), IPR040986 (Sulfhydryl oxidase, flavin adenine dinucleotide (FAD) binding domain), IPR013766 (Thioredoxin domain), IPR036249 (Thioredoxin-like superfamily), IPR042568 (Sulfhydryl oxidase, flavin adenine dinucleotide (FAD) binding domain superfamily), IPR036774 (ERV/ALR sulfhydryl oxidase domain superfamily)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
    Start_not_found: 1
  Visible: Gene: WBGene00276723
    Corresponding_transcript: PPA38354.1
    Corresponding_protein: PP51838
    Corresponding_oligo_set: GPL14372_Probes_51173
    Microarray_results: GPL14372_Probes_51173
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 2.82255 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
  Method: curated