WormBase Tree Display for CDS: PPA38369
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| PPA38369 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (39) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S196-14.41 | ||
| DB_remark | PPA-INTS-6 protein; contains similarity to Pfam domains PF10244 (Mitochondrial ribosomal subunit), PF13519 (von Willebrand factor type A domain); contains similarity to Interpro domains IPR036465 (von Willebrand factor A-like domain superfamily), IPR002035 (von Willebrand factor, type A), IPR019373 (Large ribosomal subunit protein mL51) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00276738 | ||||
| Corresponding_transcript | PPA38369.1 | |||||
| Corresponding_protein | PP67351 | |||||
| Corresponding_oligo_set | GPL14372_Probes_51242 | |||||
| GPL14372_Probes_51243 | ||||||
| GPL14372_Probes_51244 | ||||||
| GPL14372_Probes_51246 | ||||||
| GPL14372_Probes_51247 | ||||||
| Microarray_results | GPL14372_Probes_51242 | |||||
| GPL14372_Probes_51243 | ||||||
| GPL14372_Probes_51244 | ||||||
| GPL14372_Probes_51246 | ||||||
| GPL14372_Probes_51247 | ||||||
| RNASeq_FPKM | WBls:0000032 | 4.7116 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 13.3538 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Method | curated |
