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WormBase Tree Display for CDS: PPA38405

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Name Class

PPA38405SMapS_parentSequencePPA_ChrI
StructureSource_exons (14)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S196-20.20
DB_remarkcontains similarity to Pfam domain PF00344 (SecY); contains similarity to Interpro domains IPR023201 (SecY domain superfamily), IPR002208 (SecY/SEC61-alpha family)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
Artificial_intronLow_quality_sequence
VisibleGeneWBGene00276774
Corresponding_transcriptPPA38405.1
Corresponding_proteinPP69781
Corresponding_oligo_setGPL14372_Probes_51371
Microarray_resultsGPL14372_Probes_51371
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated