WormBase Tree Display for CDS: PPA38408
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PPA38408 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 33 | |||
342 | 422 | |||||
1838 | 2584 | |||||
2726 | 2797 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S196-21.3 | ||
DB_remark | contains similarity to Pfam domain PF02363 (Cysteine rich repeat); contains similarity to Interpro domain IPR003341 (Cysteine rich repeat, tripleX) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00276777 | ||||
Corresponding_transcript | PPA38408.1 | |||||
Corresponding_protein | PP55452 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |