WormBase Tree Display for CDS: PPA38409
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PPA38409 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 54 | |||
615 | 718 | |||||
835 | 856 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S196-21.4 | ||
DB_remark | contains similarity to Pfam domain PF01679 (Proteolipid membrane potential modulator); contains similarity to Interpro domain IPR000612 (Proteolipid membrane potential modulator) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00276778 | ||||
Corresponding_transcript | PPA38409.1 | |||||
Corresponding_protein | PP19390 | |||||
Corresponding_oligo_set | GPL14372_Probes_51420 | |||||
GPL14372_Probes_51422 | ||||||
Matching_cDNA | BM320096 | Inferred_automatically | transcript_builder.pl | |||
FG097762 | Inferred_automatically | transcript_builder.pl | ||||
FG097266 | Inferred_automatically | transcript_builder.pl | ||||
FG101490 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results | GPL14372_Probes_51420 | |||||
GPL14372_Probes_51422 | ||||||
RNASeq_FPKM | WBls:0000032 | 376.194 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |