WormBase Tree Display for CDS: PPA38411
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PPA38411 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 92 | |||
139 | 283 | |||||
419 | 502 | |||||
549 | 645 | |||||
731 | 873 | |||||
899 | 988 | |||||
1270 | 1377 | |||||
1608 | 1722 | |||||
2030 | 2094 | |||||
2348 | 2464 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S196-21.68 | ||
DB_remark | PPA-RRBS-1 protein; contains similarity to Pfam domain PF04939 (Ribosome biogenesis regulatory protein (RRS1)); contains similarity to Interpro domain IPR007023 (Ribosomal biogenesis regulatory protein) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00276780 | ||||
Corresponding_transcript | PPA38411.1 | |||||
Corresponding_protein | PP52192 | |||||
RNASeq_FPKM | WBls:0000032 | 7.56891 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 8.94004 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |