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WormBase Tree Display for CDS: PPA38420

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Name Class

PPA38420SMapS_parentSequencePPA_ChrI
StructureSource_exons (17)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S196-23.36
DB_remarkcontains similarity to Pfam domains PF09763 (Exocyst complex component Sec3, coiled-coil), PF13639 (Ring finger domain); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR019160 (Exocyst complex component Sec3, coiled-coil), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00276789
Corresponding_transcriptPPA38420.1
Corresponding_proteinPP64751
Corresponding_oligo_setGPL14372_Probes_7226
GPL14372_Probes_7227
GPL14372_Probes_7228
GPL14372_Probes_7229
GPL14372_Probes_7230
Microarray_resultsGPL14372_Probes_7226
GPL14372_Probes_7227
GPL14372_Probes_7228
GPL14372_Probes_7229
GPL14372_Probes_7230
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated