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WormBase Tree Display for CDS: PPA38432

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Name Class

PPA38432SMapS_parentSequencePPA_ChrI
StructureSource_exons (11)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S196-25.8
DB_remarkcontains similarity to Pfam domain PF13202 (EF hand); contains similarity to Interpro domains IPR039647 (), IPR002048 (EF-hand domain), IPR011992 (EF-hand domain pair)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00276801
Corresponding_transcriptPPA38432.1
Corresponding_proteinPP60254
Corresponding_oligo_setGPL14372_Probes_37174
GPL14372_Probes_37175
GPL14372_Probes_37176
GPL14372_Probes_37177
GPL14372_Probes_37178
GPL14372_Probes_37179
Matching_cDNAFG101032Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_37174
GPL14372_Probes_37175
GPL14372_Probes_37176
GPL14372_Probes_37177
GPL14372_Probes_37178
GPL14372_Probes_37179
RNASeq_FPKMWBls:000003216.9564From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated