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WormBase Tree Display for CDS: PPA38438

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Name Class

PPA38438SMapS_parentSequencePPA_ChrI
StructureSource_exons (34)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S196-26.5
DB_remarkcontains similarity to Pfam domain PF11701 (Myosin-binding striated muscle assembly central); contains similarity to Interpro domains IPR024660 (UNC-45/Cro1/She4, central domain), IPR019734 (Tetratricopeptide repeat), IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR011989 (Armadillo-like helical), IPR016024 (Armadillo-type fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00276807
Corresponding_transcriptPPA38438.1
Corresponding_proteinPP68183
Corresponding_oligo_setGPL14372_Probes_37278
GPL14372_Probes_37279
GPL14372_Probes_37280
GPL14372_Probes_37281
Microarray_resultsGPL14372_Probes_37278
GPL14372_Probes_37279
GPL14372_Probes_37280
GPL14372_Probes_37281
RNASeq_FPKMWBls:00000326.61972From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.13207From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated