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WormBase Tree Display for CDS: PPA38444

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Name Class

PPA38444EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrI
StructureSource_exons1165
372422
503556
13041378
21982272
DB_infoDatabasepristionchus.orgcdsgene-UMM-S196-26.76
DB_remarkPPA-ATP-4 protein; contains similarity to Pfam domain PF05511 (Mitochondrial ATP synthase coupling factor 6); contains similarity to Interpro domains IPR008387 (ATP synthase-coupling factor 6, mitochondrial), IPR036204 (ATP synthase-coupling factor 6 superfamily, mitochondrial)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00276813
Corresponding_transcriptPPA38444.1
Corresponding_proteinPP75657
Matching_cDNA (12)
RNASeq_FPKMWBls:0000032124.434From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010111.3101From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed14 Oct 2019 13:57:33WBPerson4055
Remark[191014 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated