WormBase Tree Display for CDS: PPA38444
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PPA38444 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons | 1 | 165 | |||
372 | 422 | |||||
503 | 556 | |||||
1304 | 1378 | |||||
2198 | 2272 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S196-26.76 | ||
DB_remark | PPA-ATP-4 protein; contains similarity to Pfam domain PF05511 (Mitochondrial ATP synthase coupling factor 6); contains similarity to Interpro domains IPR008387 (ATP synthase-coupling factor 6, mitochondrial), IPR036204 (ATP synthase-coupling factor 6 superfamily, mitochondrial) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00276813 | ||||
Corresponding_transcript | PPA38444.1 | |||||
Corresponding_protein | PP75657 | |||||
Matching_cDNA (12) | ||||||
RNASeq_FPKM | WBls:0000032 | 124.434 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 11.3101 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 14 Oct 2019 13:57:33 | WBPerson4055 | ||||
Remark | [191014 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |