WormBase Tree Display for CDS: PPA38478
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PPA38478 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 21 | |||
129 | 242 | |||||
291 | 382 | |||||
493 | 601 | |||||
667 | 786 | |||||
831 | 914 | |||||
961 | 1044 | |||||
1113 | 1202 | |||||
1250 | 1308 | |||||
1372 | 1435 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-5.21 | ||
DB_remark | contains similarity to Interpro domains IPR001478 (PDZ domain), IPR036034 (PDZ superfamily), IPR040264 (Uncharacterized protein T15H9.4-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00276847 | ||||
Corresponding_transcript | PPA38478.1 | |||||
Corresponding_protein | PP59839 | |||||
Corresponding_oligo_set | GPL14372_Probes_77608 | |||||
Microarray_results | GPL14372_Probes_77608 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |