WormBase Tree Display for CDS: PPA38492
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| PPA38492 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 237 | |||
| 286 | 360 | |||||
| 835 | 963 | |||||
| 1370 | 1552 | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S207-8.88 | ||
| DB_remark | contains similarity to Pfam domain PF10601 (LITAF-like zinc ribbon domain); contains similarity to Interpro domains IPR037519 (LITAF domain containing protein), IPR006629 (LPS-induced tumour necrosis factor alpha factor) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00276861 | ||||
| Corresponding_transcript | PPA38492.1 | |||||
| Corresponding_protein | PP63671 | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 18.1092 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Method | curated |
