WormBase Tree Display for CDS: PPA38517
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PPA38517 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (18) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-15.78 | ||
DB_remark | PPA-SER-6.2 protein; contains similarity to Pfam domain PF00001 (7 transmembrane receptor (rhodopsin family)); contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like, 7TM), IPR000276 (G protein-coupled receptor, rhodopsin-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00276886 | ||||
Corresponding_transcript | PPA38517.1 | |||||
Corresponding_protein | PP60495 | |||||
Corresponding_oligo_set | GPL14372_Probes_72750 | |||||
GPL14372_Probes_72751 | ||||||
Microarray_results | GPL14372_Probes_72750 | |||||
GPL14372_Probes_72751 | ||||||
RNASeq_FPKM | WBls:0000032 | 1.32343 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |