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WormBase Tree Display for CDS: PPA38526

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Name Class

PPA38526SMapS_parentSequencePPA_ChrI
StructureSource_exons156
105163
220299
366570
693797
843898
9831091
11401223
13011362
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-18.5
DB_remarkcontains similarity to Pfam domain PF00089 (Trypsin); contains similarity to Interpro domains IPR043504 (Peptidase S1, PA clan, chymotrypsin-like fold), IPR001254 (Serine proteases, trypsin domain), IPR009003 (Peptidase S1, PA clan)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00276895
Corresponding_transcriptPPA38526.1
Corresponding_proteinPP62620
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated