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WormBase Tree Display for CDS: PPA38534

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Name Class

PPA38534SMapS_parentSequencePPA_ChrI
StructureSource_exons189
306411
533632
793867
916977
10251108
13041459
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-19.46
DB_remarkPPA-PRDX-6 protein; contains similarity to Pfam domains PF00578 (AhpC/TSA family), PF10417 (C-terminal domain of 1-Cys peroxiredoxin); contains similarity to Interpro domains IPR024706 (Peroxiredoxin, AhpC-type), IPR019479 (Peroxiredoxin, C-terminal), IPR000866 (Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant), IPR036249 (Thioredoxin-like superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00276903
Corresponding_transcriptPPA38534.1
Corresponding_proteinPP02237
Corresponding_oligo_setGPL14372_Probes_72534
GPL14372_Probes_72535
GPL14372_Probes_72536
GPL14372_Probes_72537
GPL14372_Probes_72538
Matching_cDNAFG106745Inferred_automaticallytranscript_builder.pl
FG102370Inferred_automaticallytranscript_builder.pl
FG102841Inferred_automaticallytranscript_builder.pl
FG104093Inferred_automaticallytranscript_builder.pl
FG106003Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_72534
GPL14372_Probes_72535
GPL14372_Probes_72536
GPL14372_Probes_72537
GPL14372_Probes_72538
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010189.8774From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated