WormBase Tree Display for CDS: PPA38542
expand all nodes | collapse all nodes | view schema
PPA38542 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-20.80 | ||
DB_remark | contains similarity to Pfam domain PF10551 (MULE transposase domain); contains similarity to Interpro domain IPR018289 (MULE transposase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00276911 | ||||
Corresponding_transcript | PPA38542.1 | |||||
Corresponding_protein | PP53144 | |||||
Corresponding_oligo_set | GPL14372_Probes_25012 | |||||
GPL14372_Probes_26628 | ||||||
Microarray_results | GPL14372_Probes_25012 | |||||
GPL14372_Probes_26628 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |