WormBase Tree Display for CDS: PPA38545
expand all nodes | collapse all nodes | view schema
PPA38545 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 246 | |||
326 | 484 | |||||
531 | 664 | |||||
706 | 816 | |||||
868 | 976 | |||||
1024 | 1161 | |||||
1210 | 1347 | |||||
1460 | 1579 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-21.46 | ||
DB_remark | PPA-BUS-17 protein; contains similarity to Pfam domain PF01762 (Galactosyltransferase); contains similarity to Interpro domain IPR002659 (Glycosyl transferase, family 31) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00276914 | ||||
Corresponding_transcript | PPA38545.1 | |||||
Corresponding_protein | PP55728 | |||||
Corresponding_oligo_set | GPL14372_Probes_72387 | |||||
GPL14372_Probes_72388 | ||||||
GPL14372_Probes_72394 | ||||||
GPL14372_Probes_72395 | ||||||
Microarray_results | GPL14372_Probes_72387 | |||||
GPL14372_Probes_72388 | ||||||
GPL14372_Probes_72394 | ||||||
GPL14372_Probes_72395 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 16.0211 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |