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WormBase Tree Display for CDS: PPA38563

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Name Class

PPA38563SMapS_parentSequencePPA_ChrI
StructureSource_exons (58)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-24.83
DB_remarkPPA-LACT-7 protein; contains similarity to Pfam domains PF00144 (Beta-lactamase), PF17660 (Bacterial tandem repeat domain 1); contains similarity to Interpro domains IPR001466 (Beta-lactamase-related), IPR035979 (RNA-binding domain superfamily), IPR012338 (Beta-lactamase/transpeptidase-like), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00276932
Corresponding_transcriptPPA38563.1
Corresponding_proteinPP57721
Corresponding_oligo_setGPL14372_Probes_72209
GPL14372_Probes_72210
GPL14372_Probes_72211
Microarray_resultsGPL14372_Probes_72209
GPL14372_Probes_72210
GPL14372_Probes_72211
RNASeq_FPKMWBls:000003215.0451From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010114.2134From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated