WormBase Tree Display for CDS: PPA38845
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PPA38845 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 123 | |||
1247 | 1297 | |||||
1369 | 1480 | |||||
1602 | 1700 | |||||
1768 | 1826 | |||||
1897 | 2022 | |||||
2075 | 2155 | |||||
2208 | 2291 | |||||
2363 | 2404 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S245-11.48 | ||
DB_remark | contains similarity to Interpro domain IPR000742 (EGF-like domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00277214 | ||||
Corresponding_transcript | PPA38845.1 | |||||
Corresponding_protein | PP16527 | |||||
Corresponding_oligo_set | GPL14372_Probes_67745 | |||||
GPL14372_Probes_67746 | ||||||
GPL14372_Probes_67747 | ||||||
GPL14372_Probes_67749 | ||||||
Matching_cDNA | FG099493 | Inferred_automatically | transcript_builder.pl | |||
AA191841 | Inferred_automatically | transcript_builder.pl | ||||
FG098824 | Inferred_automatically | transcript_builder.pl | ||||
FE937780 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results | GPL14372_Probes_67745 | |||||
GPL14372_Probes_67746 | ||||||
GPL14372_Probes_67747 | ||||||
GPL14372_Probes_67749 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 11.3811 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |