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WormBase Tree Display for CDS: PPA38845

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Name Class

PPA38845SMapS_parentSequencePPA_ChrII
StructureSource_exons1123
12471297
13691480
16021700
17681826
18972022
20752155
22082291
23632404
DB_infoDatabasepristionchus.orgcdsgene-UMM-S245-11.48
DB_remarkcontains similarity to Interpro domain IPR000742 (EGF-like domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00277214
Corresponding_transcriptPPA38845.1
Corresponding_proteinPP16527
Corresponding_oligo_setGPL14372_Probes_67745
GPL14372_Probes_67746
GPL14372_Probes_67747
GPL14372_Probes_67749
Matching_cDNAFG099493Inferred_automaticallytranscript_builder.pl
AA191841Inferred_automaticallytranscript_builder.pl
FG098824Inferred_automaticallytranscript_builder.pl
FE937780Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_67745
GPL14372_Probes_67746
GPL14372_Probes_67747
GPL14372_Probes_67749
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010111.3811From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated