WormBase Tree Display for CDS: PPA38847
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PPA38847 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons (26) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S245-11.51 | ||
DB_remark | PPA-DAF-19 protein; contains similarity to Pfam domain PF02257 (RFX DNA-binding domain); contains similarity to Interpro domains IPR003150 (DNA-binding RFX-type winged-helix domain), IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR039779 (RFX-like DNA-binding protein) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00277216 | ||||
Corresponding_transcript | PPA38847.1 | |||||
Corresponding_protein | PP74426 | |||||
Corresponding_oligo_set | GPL14372_Probes_17440 | |||||
GPL14372_Probes_17441 | ||||||
Microarray_results | GPL14372_Probes_17440 | |||||
GPL14372_Probes_17441 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 21 Feb 2019 09:58:04 | WBPerson4055 | ||||
Remark | [190221 mh6] updated to the latest set provided my MPG | Curator_confirmed | WBPerson18244 | |||
Method | curated |