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WormBase Tree Display for CDS: PPA38847

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Name Class

PPA38847EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrII
StructureSource_exons (26)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S245-11.51
DB_remarkPPA-DAF-19 protein; contains similarity to Pfam domain PF02257 (RFX DNA-binding domain); contains similarity to Interpro domains IPR003150 (DNA-binding RFX-type winged-helix domain), IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR039779 (RFX-like DNA-binding protein)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00277216
Corresponding_transcriptPPA38847.1
Corresponding_proteinPP74426
Corresponding_oligo_setGPL14372_Probes_17440
GPL14372_Probes_17441
Microarray_resultsGPL14372_Probes_17440
GPL14372_Probes_17441
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed21 Feb 2019 09:58:04WBPerson4055
Remark[190221 mh6] updated to the latest set provided my MPGCurator_confirmedWBPerson18244
Methodcurated