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WormBase Tree Display for CDS: PPA38872

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Name Class

PPA38872SMapS_parentSequencePPA_ChrII
StructureSource_exons1138
265306
537647
698798
9031005
10511126
11701282
14361565
17461844
18821952
DB_infoDatabasepristionchus.orgcdsgene-UMM-S245-17.34
DB_remarkcontains similarity to Pfam domain PF00250 (Forkhead domain); contains similarity to Interpro domains IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR001766 (Fork head domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00277241
Corresponding_transcriptPPA38872.1
Corresponding_proteinPP67625
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated