WormBase Tree Display for CDS: PPA38872
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PPA38872 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 138 | |||
265 | 306 | |||||
537 | 647 | |||||
698 | 798 | |||||
903 | 1005 | |||||
1051 | 1126 | |||||
1170 | 1282 | |||||
1436 | 1565 | |||||
1746 | 1844 | |||||
1882 | 1952 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S245-17.34 | ||
DB_remark | contains similarity to Pfam domain PF00250 (Forkhead domain); contains similarity to Interpro domains IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR001766 (Fork head domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00277241 | ||||
Corresponding_transcript | PPA38872.1 | |||||
Corresponding_protein | PP67625 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |