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WormBase Tree Display for CDS: PPA38981

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Name Class

PPA38981SMapS_parentSequencePPA_ChrI
StructureSource_exons (35)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S259-3.36
DB_remarkcontains similarity to Pfam domains PF00059 (Lectin C-type domain), PF00431 (CUB domain); contains similarity to Interpro domains IPR000859 (CUB domain), IPR016186 (C-type lectin-like/link domain superfamily), IPR001304 (C-type lectin-like), IPR035914 (Spermadhesin, CUB domain superfamily), IPR016187 (C-type lectin fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00277350
Corresponding_transcriptPPA38981.1
Corresponding_proteinPP69946
Corresponding_oligo_setGPL14372_Probes_73348
GPL14372_Probes_73349
GPL14372_Probes_73350
GPL14372_Probes_73351
GPL14372_Probes_73352
Microarray_resultsGPL14372_Probes_73348
GPL14372_Probes_73349
GPL14372_Probes_73350
GPL14372_Probes_73351
GPL14372_Probes_73352
RNASeq_FPKMWBls:00000321.09467From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010116.8056From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated