WormBase Tree Display for CDS: PPA38988
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PPA38988 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (16) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S259-3.65 | ||
DB_remark | contains similarity to Pfam domain PF03982 (Diacylglycerol acyltransferase); contains similarity to Interpro domains IPR007130 (Diacylglycerol acyltransferase), IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR000418 (Ets domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00277357 | ||||
Corresponding_transcript | PPA38988.1 | |||||
Corresponding_protein | PP73023 | |||||
Corresponding_oligo_set | GPL14372_Probes_21230 | |||||
GPL14372_Probes_21231 | ||||||
Microarray_results | GPL14372_Probes_21230 | |||||
GPL14372_Probes_21231 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |