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WormBase Tree Display for CDS: PPA38993

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Name Class

PPA38993SMapS_parentSequencePPA_ChrI
StructureSource_exons (26)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S259-4.22
DB_remarkPPA-ACS-12 protein; contains similarity to Pfam domains PF00501 (AMP-binding enzyme), PF13193 (AMP-binding enzyme C-terminal domain); contains similarity to Interpro domains IPR025110 (AMP-binding enzyme, C-terminal domain), IPR000873 (AMP-dependent synthetase/ligase domain), IPR042099 (ANL, N-terminal domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00277362
Corresponding_transcriptPPA38993.1
Corresponding_proteinPP59366
Corresponding_oligo_setGPL14372_Probes_62446
GPL14372_Probes_62447
GPL14372_Probes_62448
GPL14372_Probes_62449
GPL14372_Probes_62450
GPL14372_Probes_62451
Microarray_resultsGPL14372_Probes_62446
GPL14372_Probes_62447
GPL14372_Probes_62448
GPL14372_Probes_62449
GPL14372_Probes_62450
GPL14372_Probes_62451
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.75896From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated