WormBase Tree Display for CDS: PPA39004
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PPA39004 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 101 | |||
680 | 732 | |||||
1050 | 1093 | |||||
1136 | 1195 | |||||
1577 | 1619 | |||||
1737 | 1782 | |||||
1826 | 1925 | |||||
1964 | 2007 | |||||
3162 | 3171 | |||||
4155 | 4190 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S259-5.82 | ||
DB_remark | contains similarity to Interpro domain IPR036236 (Zinc finger C2H2 superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00277373 | ||||
Corresponding_transcript | PPA39004.1 | |||||
Corresponding_protein | PP65000 | |||||
Corresponding_oligo_set | GPL14372_Probes_15404 | |||||
GPL14372_Probes_15406 | ||||||
Microarray_results | GPL14372_Probes_15404 | |||||
GPL14372_Probes_15406 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |