WormBase Tree Display for CDS: PPA39021

PPA39021 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 128
      173 297
      341 568
      612 688
      733 861
      906 1130
  DB_info: Database: pristionchus.org cds gene-UMM-S259-7.84
    DB_remark: contains similarity to Pfam domain PF00112 (Papain family cysteine protease); contains similarity to Interpro domains IPR038765 (Papain-like cysteine peptidase superfamily), IPR000668 (Peptidase C1A, papain C-terminal)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00277390
    Corresponding_transcript: PPA39021.1
    Corresponding_protein: PP51239
    Corresponding_oligo_set: GPL14372_Probes_15453
      GPL14372_Probes_15454
      GPL14372_Probes_15455
      GPL14372_Probes_15456
      GPL14372_Probes_15457
    Matching_cDNA: BI500649 Inferred_automatically: transcript_builder.pl
      EB183719 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_15453
      GPL14372_Probes_15454
      GPL14372_Probes_15455
      GPL14372_Probes_15456
      GPL14372_Probes_15457
    RNASeq_FPKM: WBls:0000032 17.9076 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 68.746 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
  Method: curated