WormBase Tree Display for CDS: PPA39023
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PPA39023 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 109 | |||
186 | 328 | |||||
441 | 542 | |||||
834 | 917 | |||||
1016 | 1078 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S259-10.4 | ||
DB_remark | contains similarity to Pfam domain PF01145 (SPFH domain / Band 7 family); contains similarity to Interpro domains IPR000163 (Prohibitin), IPR001107 (Band 7 domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00277392 | ||||
Corresponding_transcript | PPA39023.1 | |||||
Corresponding_protein | PP66803 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |