WormBase Tree Display for CDS: PPA39042
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PPA39042 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (60) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S259-11.37 | ||
DB_remark | contains similarity to Interpro domains IPR040366 (Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14), IPR000571 (Zinc finger, CCCH-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00277411 | ||||
Corresponding_transcript | PPA39042.1 | |||||
Corresponding_protein | PP64783 | |||||
Corresponding_oligo_set (25) | ||||||
Matching_cDNA | FE932743 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results (25) | ||||||
RNASeq_FPKM | WBls:0000032 | 4.0961 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 8.29218 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |