WormBase Tree Display for CDS: PPA39051
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PPA39051 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 9 | |||
70 | 159 | |||||
200 | 303 | |||||
508 | 594 | |||||
669 | 779 | |||||
826 | 907 | |||||
1232 | 1293 | |||||
1372 | 1439 | |||||
1665 | 1788 | |||||
1838 | 1973 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S259-13.8 | ||
DB_remark | contains similarity to Pfam domain PF00709 (Adenylosuccinate synthetase); contains similarity to Interpro domains IPR042110 (Adenylosuccinate synthetase, domain 2), IPR001114 (Adenylosuccinate synthetase), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR042111 (Adenylosuccinate synthetase, domain 3) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
End_not_found | ||||||
Visible | Gene | WBGene00277420 | ||||
Corresponding_transcript | PPA39051.1 | |||||
Corresponding_protein | PP61373 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |