WormBase Tree Display for CDS: PPA39053
expand all nodes | collapse all nodes | view schema
PPA39053 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 21 | |||
73 | 165 | |||||
214 | 333 | |||||
375 | 496 | |||||
1401 | 1567 | |||||
1612 | 1874 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S259-13.19 | ||
DB_remark | contains similarity to Interpro domains IPR032976 (YjeF N-terminal domain-containing protein NAXE-like), IPR003645 (Follistatin-like, N-terminal) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00277422 | ||||
Corresponding_transcript | PPA39053.1 | |||||
Corresponding_protein | PP15772 | |||||
Corresponding_oligo_set | GPL14372_Probes_63116 | |||||
GPL14372_Probes_63117 | ||||||
GPL14372_Probes_63118 | ||||||
Microarray_results | GPL14372_Probes_63116 | |||||
GPL14372_Probes_63117 | ||||||
GPL14372_Probes_63118 | ||||||
RNASeq_FPKM | WBls:0000032 | 27.6793 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 58.855 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |