WormBase Tree Display for CDS: PPA39054
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PPA39054 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (20) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S259-13.69 | ||
DB_remark | PPA-CAH-5 protein; contains similarity to Pfam domain PF00194 (Eukaryotic-type carbonic anhydrase); contains similarity to Interpro domains IPR036398 (Alpha carbonic anhydrase domain superfamily), IPR001148 (Alpha carbonic anhydrase domain), IPR023561 (Carbonic anhydrase, alpha-class) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00277423 | ||||
Corresponding_transcript | PPA39054.1 | |||||
Corresponding_protein | PP66470 | |||||
Corresponding_oligo_set | GPL14372_Probes_63076 | |||||
GPL14372_Probes_63077 | ||||||
GPL14372_Probes_63078 | ||||||
Microarray_results | GPL14372_Probes_63076 | |||||
GPL14372_Probes_63077 | ||||||
GPL14372_Probes_63078 | ||||||
RNASeq_FPKM | WBls:0000032 | 61.6526 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 13.4841 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |