WormBase Tree Display for CDS: PPA39060
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| PPA39060 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 12 | |||
| 50 | 148 | |||||
| 459 | 548 | |||||
| 590 | 709 | |||||
| 766 | 882 | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S259-14.50 | ||
| DB_remark | contains similarity to Pfam domain PF10326 (Serpentine type 7TM GPCR chemoreceptor Str); contains similarity to Interpro domain IPR019428 (7TM GPCR, serpentine receptor class r (Str)) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00277429 | ||||
| Corresponding_transcript | PPA39060.1 | |||||
| Corresponding_protein | PP54409 | |||||
| Corresponding_oligo_set | GPL14372_Probes_15569 | |||||
| Microarray_results | GPL14372_Probes_15569 | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Method | curated |
