WormBase Tree Display for CDS: PPA39146
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PPA39146 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 66 | |||
115 | 186 | |||||
243 | 305 | |||||
423 | 521 | |||||
565 | 645 | |||||
801 | 880 | |||||
960 | 1008 | |||||
1080 | 1199 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S273-9.44 | ||
DB_remark | contains similarity to Pfam domain PF10318 (Serpentine type 7TM GPCR chemoreceptor Srh); contains similarity to Interpro domains IPR019423 (7TM GPCR, serpentine receptor class j (Srj)), IPR019422 (7TM GPCR, serpentine receptor class h (Srh)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00277515 | ||||
Corresponding_transcript | PPA39146.1 | |||||
Corresponding_protein | PP55286 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |