WormBase Tree Display for CDS: PPA39153
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PPA39153 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 160 | |||
207 | 367 | |||||
446 | 583 | |||||
1132 | 1257 | |||||
1334 | 1405 | |||||
1481 | 1594 | |||||
1674 | 1748 | |||||
1829 | 1901 | |||||
6599 | 7026 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S273-10.50 | ||
DB_remark | PPA-CYD-1 protein; contains similarity to Pfam domain PF00134 (Cyclin, N-terminal domain); contains similarity to Interpro domains IPR006671 (Cyclin, N-terminal), IPR039361 (Cyclin), IPR013763 (Cyclin-like domain), IPR036915 (Cyclin-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00277522 | ||||
Corresponding_transcript | PPA39153.1 | |||||
Corresponding_protein | PP68639 | |||||
Corresponding_oligo_set | GPL14372_Probes_25411 | |||||
GPL14372_Probes_25412 | ||||||
Microarray_results | GPL14372_Probes_25411 | |||||
GPL14372_Probes_25412 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 3.33318 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |