WormBase Tree Display for CDS: PPA39157
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PPA39157 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 47 | |||
186 | 252 | |||||
453 | 552 | |||||
634 | 699 | |||||
747 | 811 | |||||
1003 | 1100 | |||||
1319 | 1497 | |||||
2034 | 2155 | |||||
2272 | 2332 | |||||
2381 | 2715 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S273-11.61 | ||
DB_remark | contains similarity to Pfam domain PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00277526 | ||||
Corresponding_transcript | PPA39157.1 | |||||
Corresponding_protein | PP71947 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |