WormBase Tree Display for CDS: PPA39165
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PPA39165 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 36 | |||
361 | 433 | |||||
480 | 573 | |||||
641 | 687 | |||||
754 | 857 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S273-12.34 | ||
DB_remark | contains similarity to Pfam domain PF07486 (Cell Wall Hydrolase); contains similarity to Interpro domains IPR042047 (Cell wall hydrolase SleB, domain 1), IPR011105 (Cell wall hydrolase, SleB) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00277534 | ||||
Corresponding_transcript | PPA39165.1 | |||||
Corresponding_protein | PP64497 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |